National Heart Lung and Blood Institute
National Institutes of Health
Department of Health and Human Services
Proteomics Informatics Course
Next course will be May 12-16, 2008.
Prerequisite for participation in the course is a demonstrated understanding in the operation of tandem mass spectrometers, the basic structure and interpretation of peptide MS/MS spectra and proficiency in the use of computers. A commitment to attend all five days of the course is also required.
Contact the Seattle Proteome Center (info@proteomecenter.org) for information.
The Proteomics Standards Research Group (sPRG) of the Association of Biomolecular Resource Facilities (ABRF) would like you to participate in a collaborative study focusing on the ability of core facilities to determine the identities and phosphorylation sites of multiple proteins present in a single sample.
The primary goals of this study are to provide each participating laboratory with an opportunity to evaluate its capabilities and approaches with regard to:
• Methods used to identify proteins
• Methods used for phosphoprotein and phosphopeptide enrichment
• Methods used for phosphorylation site identification
Non-members are encouraged to join the ABRF (for more information, go to http://www.abrf.org).
The sPRG anticipates distributing the samples on November 15, 2006 and requests the resulting data to be returned by December 31, 2006 so that sufficient time will be available to tabulate the results and present them at the 2007 ABRF Meeting (March 31-April 3, Tampa, FL).
Requests for samples must be submitted by e-mail to mag4@columbia.edu prior to Oct. 31, 2006.
The primary goals of this study are to provide each participating laboratory with an opportunity to evaluate its capabilities and approaches with regard to:
• Methods used to identify proteins
• Methods used for phosphoprotein and phosphopeptide enrichment
• Methods used for phosphorylation site identification
Non-members are encouraged to join the ABRF (for more information, go to http://www.abrf.org).
The sPRG anticipates distributing the samples on November 15, 2006 and requests the resulting data to be returned by December 31, 2006 so that sufficient time will be available to tabulate the results and present them at the 2007 ABRF Meeting (March 31-April 3, Tampa, FL).
Requests for samples must be submitted by e-mail to mag4@columbia.edu prior to Oct. 31, 2006.
The Proteomics Research Group (PRG) (Note: not the sPRG!) of the Association of Biomolecular Resource Facilities (ABRF) would like to invite you to participate in a follow-up collaborative study focusing on evaluating
different techniques for determining abundance differences of several unknown proteins across three samples.
The primary goal of this study is to give each laboratory an opportunity to evaluate its capabilities and approaches with regard to:
• The detection and identification of known proteins present in different amounts in three samples that also contain complex mixtures of background proteins
• The determination of the relative amounts of the standard proteins in the three samples
• Comparison of the number of correct and incorrect results as an indication of the overall performance of the methodologies used
For more information about the Proteomics Research Group of ABRF, see the following web link which contains past and current discussions --
http://www.abrf.org/index.cfm/group.show/Proteomics.34.htm
The PRG anticipates distributing the samples in November 2006, and requests that the resulting data be returned by December 31, 2006 so that sufficient time will be available to tabulate the results for presentation at the 2007 ABRF Meeting (Mar. 31 – Apr. 3, 2007, Tampa, FL).
Requests for samples must be submitted by e-mail to abrfPRG2007@yahoo.com prior to October 30, 2006.
Please include the words “PRG SAMPLE REQUEST” in the subject line to indicate that you are requesting samples for the PRG2007 Quantitative Proteomics Study (not to be confused with the sPRG Proteomics Standards study).
different techniques for determining abundance differences of several unknown proteins across three samples.
The primary goal of this study is to give each laboratory an opportunity to evaluate its capabilities and approaches with regard to:
• The detection and identification of known proteins present in different amounts in three samples that also contain complex mixtures of background proteins
• The determination of the relative amounts of the standard proteins in the three samples
• Comparison of the number of correct and incorrect results as an indication of the overall performance of the methodologies used
For more information about the Proteomics Research Group of ABRF, see the following web link which contains past and current discussions --
http://www.abrf.org/index.cfm/group.show/Proteomics.34.htm
The PRG anticipates distributing the samples in November 2006, and requests that the resulting data be returned by December 31, 2006 so that sufficient time will be available to tabulate the results for presentation at the 2007 ABRF Meeting (Mar. 31 – Apr. 3, 2007, Tampa, FL).
Requests for samples must be submitted by e-mail to abrfPRG2007@yahoo.com prior to October 30, 2006.
Please include the words “PRG SAMPLE REQUEST” in the subject line to indicate that you are requesting samples for the PRG2007 Quantitative Proteomics Study (not to be confused with the sPRG Proteomics Standards study).
Insilicos launches proteomics software platform in collaboration with Seattle Proteome Center
(2006-06-09)
On May 29 Seattle life sciences company Insilicos formally announced the launch of Insilicos Proteomics Pipeline (IPP), the first high-performance software system for identification and analysis of proteomics data....> read more from the attached documents or the Summer NewsSpots
For more information about IPP, visit the Insilicos web site www.insilicos.com or contact Insilicos at info@insilicos.com". For information about the Trans-Proteomic Pipeline and other proteomics tools developed by the Seattle Proteome Center, go to http://tools.proteomecenter.org/software.php.
For more information about IPP, visit the Insilicos web site www.insilicos.com or contact Insilicos at info@insilicos.com". For information about the Trans-Proteomic Pipeline and other proteomics tools developed by the Seattle Proteome Center, go to http://tools.proteomecenter.org/software.php.
NIH Programs in Technology and Infrastructure Development
This special issue of the Journal of Proteome Research includes a paper by Doug Sheeley (NCRR), Joe Breen (NIAID) and Susan Old about the protoemics initiatives in their respective institutes
This special issue of the Journal of Proteome Research includes a paper by Doug Sheeley (NCRR), Joe Breen (NIAID) and Susan Old about the protoemics initiatives in their respective institutes